Reclassification of the Scolopacidae
Effect on SACC: This proposal would divide our current family Scolopacidae into 5 subfamilies and change the sequence of genera within the family.
Background: Our current classification does not include subfamily structure and follows a traditional sequence of genera. The reason for the lack of subfamily structure was our wise assessment of the lack of concordance among other classifications and the absence of a solid DNA-based phylogeny. Our footnote is as follows:
1. <note on genera, linear sequence> Jehl (1968b). The family Scolopacidae is traditionally split into five or more subfamilies and additional tribes (e.g., AOU 1998). Livezey (2010) recognized four subfamilies (Arenariinae, Calidrinae, Tringinae, Scolopacinae) and maintained the phalaropes as a separate family. Genetic data (e.g. Gibson & Baker 2012), however, provide very weak or no support for the monophyly of these groups, and although the phalaropes are monophyletic, they are deeply embedded in the Scolopacidae and sister to the tringines. Gibson & Baker (2012) identified five major lineages in the family. SACC proposal needed to recognize five subfamilies.
New information: Gibson & Baker (2012) produced a phylogenetic hypothesis based on strong taxon-sampling (84 species) and good gene-sampling (6300+ bps; 1 nuclear + 4 mitochondrial genes). Branching patterns in general were well-resolved (except for problems within the explosive calidridine radiation). Here is their tree – sorry about the poor resolution – if anyone needs a pdf, just let me know:
I suggest that the best interpretation of the tree is to recognize 5 major lineages and to give each one subfamily rank. Note that Gibson & Baker name 8 groups, not 5, which would be an alternative treatment, i.e. 8 subfamilies. I suggest condensation to five for the following reasons.
(1) The Snipe-Dowitcher-Woodcock group is probably best treated as a single group because the branch lengths connecting them are very short, inclusion of Limnodromus semipalmatus in the Dowitchers has weak support, and taxon-sampling within the Woodcock and Snipe groups is weak (including absence of Limnocryptes).
(2) The Phalaropes if treated as a subfamily would technically also have to include Xenus (Terek Sandpiper), which groups with them albeit with substandard support. That result is best treated as anomalous, in my opinion, until corroborated by additional data (parallel to the initial anomalous results for Pluvialis; see Baker et al. 2012). An alternative approach would be to recognize the Phalaropes as a subfamily and to retain Xenus in its traditional spot in the Tringinae or place it as Incertae Sedis. Although not giving the phalaropes subfamily rank might seem extreme, keep in mind that Phalaropus tricolor (which really deserves to have its monotypic genus status reinstated: Steganopus) strikes many field people as having some tringine-like behaviors.
Tangentially, I take the opportunity to point out that Livezey (2010) placed the phalaropes in their own family, as they were for most of their history due to their unusual morphology. Assuming that the gene-based phylogeny reflects historical relationships, this is yet another warning for use of morphological data to infer phylogeny. Livezey’s careful and quantitative analysis of hundreds of phenotypic characters was unable to distinguish highly derived morphological change from lineage history, just as it was unable to identify strongly convergent morphology (e.g., Livezey’s sister relationship between Podicipedidae and Gaviidae).
Another point worth considering is giving subfamily rank to the Turnstones. Although not labeled as a group by Gibson & Baker, just looking at relative divergence, they deserve naming if Woodcocks, Snipes, and Dowitchers do, and their distinctive morphology has led to their classification as a separate family or subfamily in the past. But looking at branch lengths and node depths in the tree, if turnstones are treated as a subfamily, then snipes, woodcocks, and dowitchers also should be. As predicted from any categorical scheme inflicted on a continuum of differentiation, borderline situations are inevitable. I suggest that that if we decide to include the Tribe level in our classification, then turnstones would be a prime candidate for recognition at that level.
Taking the Gibson-Baker tree and transforming it to a classification for species in the SACC area, including changes in species sequence to match the tree, would look like this:
Bartramia longicauda Upland Sandpiper
Numenius borealis Eskimo Curlew
Numenius phaeopus Whimbrel
Numenius americanus Long-billed Curlew
Limosa lapponica Bar-tailed Godwit
Limosa limosa Black-tailed Godwit
Limosa haemastica Hudsonian Godwit
Limosa fedoa Marbled Godwit
Arenaria interpres Ruddy Turnstone
Arenaria melanocephala Black Turnstone
Aphriza virgata Surfbird
Calidris canutus Red Knot
Calidris alba Sanderling
Calidris pusilla Semipalmated Sandpiper
Calidris mauri Western Sandpiper
Calidris minutilla Least Sandpiper
Calidris fuscicollis White-rumped Sandpiper
Calidris bairdii Baird's Sandpiper
Calidris melanotos Pectoral Sandpiper
Calidris alpina Dunlin
Calidris ferruginea Curlew Sandpiper
Calidris himantopus Stilt Sandpiper
Tryngites subruficollis Buff-breasted Sandpiper
Philomachus pugnax Ruff
Limnodromus griseus Short-billed Dowitcher
Limnodromus scolopaceus Long-billed Dowitcher
Gallinago imperialis Imperial Snipe
Gallinago jamesoni Andean Snipe
Gallinago stricklandii Fuegian Snipe
Gallinago nobilis Noble Snipe
Gallinago undulata Giant Snipe
Gallinago delicata Wilson's Snipe
Gallinago paraguaiae South American Snipe
Gallinago andina Puna Snipe
Phalaropus tricolor Wilson's Phalarope
Phalaropus lobatus Red-necked Phalarope
Phalaropus fulicarius Red Phalarope
Xenus cinereus Terek Sandpiper
Actitis macularius Spotted Sandpiper
Tringa solitaria Solitary Sandpiper
Tringa incana Wandering Tattler
Tringa melanoleuca Greater Yellowlegs
Tringa semipalmata Willet
Tringa flavipes Lesser Yellowlegs
Tringa glareola Wood Sandpiper
1. The above does not deal with the problems of generic limits in the Calidrinae, e.g., sister relationship of Aphriza to C. canutus; see Banks (2012). Dick Banks is submitting a proposal to NACC on this, and I suggest we do not meddle until dust settled.
2. The sequence from Xenus through T. glareola now conforms to current NACC sequence.
3. SACC proposal 548 would split Chubbia from Gallinago, but that would not change the linear sequence of species.
4. Banks (2012) used Arenariinae Stejneger, 1885, as the subfamily name, even though Calidrinae Reichenbach, 1849, is older name: “The family-group name for the turnstones was originally based on the generic name Strepsilas Illiger, 1811 by Gray (1840), as Strepsilinae (fide Bock 1994:138). Stejneger (1885:95) introduced the name Arenariinae, based on Arenarius Brisson, 1760, a name with many years priority over Strepsilas, and it thus became the proper name for the subfamily (see Ridgway 1919:42). For purposes of priority, Arenariinae dates from 1840 (ICZN 1999, Art. 40.2). The name Calidridinae was not established until l849 (fide Bock 1994:138) and thus is a junior synonym of Arenariinae.”
Discussion & Recommendation: See proposal 552 for my views on the value of using additional ranks, in this case subfamily, in our classification. I am open to alternative classifications, but barring viable alternatives, I recommend a YES on this as improving the information content of our classification.
BANKS, R. C. 2012. Classification and nomenclature of the sandpipers (Aves: Arenariinae). Zootaxa 3513: 86-88.
GIBSON, R., AND A. BAKER. 2012. Multiple gene sequences resolve phylogenetic relationships in the shorebird suborder Scolopaci (Aves: Charadriiformes). Molecular Phylogenetics and Evolution 64: 66–72.
LIVEZEY, B. C. 2010. Phylogenetics of modern shorebirds (Charadriiformes) based on phenotypic evidence: analysis and discussion. Zoological Journal of the Linnean Society 160: 567-618.
Van Remsen, October 2012
Comments from Stiles: “A very qualified YES (but note that Chubbia is not reinstated here but will be if 546 passes. Also see the extensive Raty commentaries on the Scolopacidae in the “TiF Classification” (whatever this is). Note that here Calidris is restricted to canutus and a couple of OW species, and includes Aphriza; all the smaller Calidris are treated in Ereunetes. Also, Limicoli is considered to have priority over Scolopaci (or -inae, for subfamilies). These points seem worth considering.”
Comments from Pacheco: “YES. Considerando todos os pontos, incluindo os adicionais.”
Comments from Cadena: “YES (see comments under proposal 552).”
Comments from Pérez-Emán: “NO. I like this proposal better than previous ones on the same topic (552 and 553) because it incorporates some behavioral and morphological issues into the discussion (in the case of Phalaropes and Turnstones). However, integrating such information provides an interesting example about how different interpretations of the same data might result in a different subfamily classification (discussions in Gibson & Baker (2012) and in this proposal). Moreover, as pointed out by Remsen, depending on the importance or interpretation given to branch lengths or node depths in the tree, one can come out with different subfamily arrangements. Thus, such borderline situations discussed by Remsen could be more the rule than the exception and might result in non-meaningful classifications at the subfamily level.”
Comments from Nores: “YES. This seems like the best way to go given available evidence.”
style='font-family:Arial;mso-fareast-font-family:Cambria;mso-fareast-theme-font: minor-latin;mso-bidi-font-family:Arial'> it with the phalaropes (of which it is quite different) or put it in an own subfamily?”
Response to Nores from Remsen: It was because of the “Xenus problem” that phalaropes were not placed in a subfamily. Xenus is an odd bird, but it is definitely not a phalarope, and so creating a subfamily for phalaropes would present a problem, given substandard support for that grouping. Further, P. tricolor is really as “tringine” as “phalarope” in terms of foraging behavior and foot morphology, so the distinctiveness phenotypically between the two groups is bridged to a degree by P. tricolor (for which I have intended to submit a proposal to NACC to restore its monotypic genus status, now fortified by the large genetic distance found by Gibson & Baker between it and the “real” phalaropes. Finally, I think we should follow NACC on this for now, and deviate from it only by the process of a separate proposal to NACC.”